napari_cellseg3d.code_models

napari_cellseg3d.code_models#

This folder contains the code used by models in the plugin.

  • models folder: contains the model classes, which are wrappers for the actual models. The wrappers are used to ensure that the models are compatible with the plugin.

  • model_framework.py: contains the code for the model framework, used by training and inference plugins

  • worker_inference.py: contains the code for the inference worker

  • worker_training.py: contains the code for the training worker

  • instance_segmentation.py: contains the code for instance segmentation

  • crf.py: contains the code for the CRF postprocessing

  • worker_utils.py: contains functions used by the workers

Modules

models

Contains model code and wrappers for the models, as classes.